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1.
Biochemistry (Mosc) ; 89(Suppl 1): S234-S248, 2024 Jan.
Article in English | MEDLINE | ID: mdl-38621753

ABSTRACT

This review highlights operational principles, features, and modern aspects of the development of third-generation sequencing technology of biopolymers focusing on the nucleic acids analysis, namely the nanopore sequencing system. Basics of the method and technical solutions used for its realization are considered, from the first works showing the possibility of creation of these systems to the easy-to-handle procedure developed by Oxford Nanopore Technologies company. Moreover, this review focuses on applications, which were developed and realized using equipment developed by the Oxford Nanopore Technologies, including assembly of whole genomes, methagenomics, direct analysis of the presence of modified bases.


Subject(s)
Nanopore Sequencing , Nanopores , Sequence Analysis, DNA/methods , Biopolymers , High-Throughput Nucleotide Sequencing/methods
2.
Biochemistry (Mosc) ; 88(Suppl 1): S21-S38, 2023 Jan.
Article in English | MEDLINE | ID: mdl-37069112

ABSTRACT

The review describes the role of telomeres and telomerase in tumor progression, as well as various mechanisms of the activation of telomerase reverse transcriptase (TERT) expression in CNS tumors and other cancers. The main mechanism of TERT activation involves acquisition of somatic mutations by the TERT gene promoter (TERTp). The article presents information on the TERTp structure and transcription factors directly interacting with TERTp and regulating its transcription. The prospects of using the mutational status of TERTp as a prognostic marker of CNS malignancies and other tumors with a common profile of TERTp mutations are discussed.


Subject(s)
Brain Neoplasms , Promoter Regions, Genetic , Telomerase , Humans , Brain Neoplasms/genetics , Mutation , Prognosis , Telomerase/genetics , Transcription Factors/genetics
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